.readthedocs.yml
CHANGELOG.rst
LICENSE
MANIFEST.in
README.rst
codecov.yml
pyproject.toml
setup.py
docs/conf.py
docs/index.rst
docs/module_options.rst
docs/requirements-docs.txt
docs/_static/images/fingerprint.fodg
docs/_static/images/fingerprint.svg
docs/_static/images/overrepresented_sampling.fodg
docs/_static/images/overrepresented_sampling.svg
docs/includes/CHANGELOG.rst
docs/includes/README.rst
src/sequali/__init__.py
src/sequali/__main__.py
src/sequali/_qc.pyi
src/sequali/_qcmodule.c
src/sequali/_version.py
src/sequali/adapters.py
src/sequali/murmur3.h
src/sequali/py.typed
src/sequali/report_modules.py
src/sequali/score_to_error_rate.h
src/sequali/sequence_identification.py
src/sequali/util.py
src/sequali/wanghash.h
src/sequali.egg-info/PKG-INFO
src/sequali.egg-info/SOURCES.txt
src/sequali.egg-info/dependency_links.txt
src/sequali.egg-info/entry_points.txt
src/sequali.egg-info/requires.txt
src/sequali.egg-info/top_level.txt
src/sequali/adapters/adapter_list.tsv
src/sequali/contaminants/README
src/sequali/contaminants/UniVec.fasta
src/sequali/contaminants/oxford_nanopore.fasta
src/sequali/contaminants/oxford_nanopore_barcodes.fasta
src/sequali/style/sequali_report.css