Metadata-Version: 2.1
Name: depp-test
Version: 0.3.11
Summary: DEPP: Deep Learning Enables Extending Species Trees using Single Genes
Home-page: https://github.com/yueyujiang/DEPP
Author: Yueyu Jiang
Author-email: y5jiang@ucsd.edu
Description-Content-Type: text/plain
License-File: LICENSE
Requires-Dist: numpy ==1.22.3
Requires-Dist: treeswift ==1.1.19
Requires-Dist: torch ==1.11.0
Requires-Dist: pandas ==1.4.2
Requires-Dist: pytorch-lightning ==1.5.4
Requires-Dist: biopython ==1.79
Requires-Dist: omegaconf ==2.1.0
Requires-Dist: apples
Requires-Dist: scipy ==1.10.1
Requires-Dist: dendropy ==4.5.2

DEPP is a deep-learning-based tool for phylogenetic placement.Output of the tool is the distance matrix between the query sequences and the backbone sequences
