.gitignore
LICENSE.txt
Makefile
README.md
cgranges.c
cgranges.cpython-36m-darwin.so
cgranges.h
example
example.c
khash.h
setup.py
cgranges.egg-info/PKG-INFO
cgranges.egg-info/SOURCES.txt
cgranges.egg-info/dependency_links.txt
cgranges.egg-info/top_level.txt
cpp/IITree.h
cpp/Makefile
cpp/example.cpp
python/README.rst
python/cgranges.c
python/cgranges.pyx
test/IntervalTree.h
test/Makefile
test/bedcov-cr
test/bedcov-cr.c
test/bedcov-cr.js
test/bedcov-cr.py
test/bedcov-cr1.py
test/bedcov-cr2.py
test/bedcov-iitree
test/bedcov-iitree.cpp
test/bedcov-itree.cpp
test/bedcov-naive.js
test/bedcov-ncls.py
test/bedcov-qs.py
test/kseq.h
test/test1.bed
test/test2.bed
test/3rd-party/README.md
test/3rd-party/AIList/AIList.c
test/3rd-party/AIList/AIList.h
test/3rd-party/AITree/AITree.c
test/3rd-party/AITree/compiler.h
test/3rd-party/AITree/interval_tree.c
test/3rd-party/AITree/interval_tree.h
test/3rd-party/AITree/interval_tree_generic.h
test/3rd-party/AITree/rbtree.c
test/3rd-party/AITree/rbtree.h
test/3rd-party/AITree/rbtree_augmented.h
test/3rd-party/NCList/intervaldb.c
test/3rd-party/NCList/intervaldb.h
test/bedcov-cr.dSYM/Contents/Info.plist
test/bedcov-cr.dSYM/Contents/Resources/DWARF/bedcov-cr
test/bedcov-iitree.dSYM/Contents/Info.plist
test/bedcov-iitree.dSYM/Contents/Resources/DWARF/bedcov-iitree