Metadata-Version: 2.1
Name: py-cortex-api
Version: 1.0
Summary: Python API for cortex.
Home-page: https://github.com/iqbal-lab-org/py-cortex-api
License: UNKNOWN
Description: # py-cortex-api
        Python API for [cortex](https://github.com/iqbal-lab/cortex).
        
        # Install
        ```
        pip3 install git+https://github.com/iqbal-lab-org/py-cortex-api
        ```
        
        #### Requirements
        ```
        sudo apt install r-base-core
        ```
        
        # Usage
        Use a list to pass in reads files, even if there is only one file.
        
        ```python
        import cortex
        cortex.calls("./reference.fasta",
                     ["./reads.fastq"],
                     "./output",
                     "sample_name")
        ```
        
        # Licence
        MIT
        
Platform: UNKNOWN
Description-Content-Type: text/markdown
