Metadata-Version: 2.1
Name: corgie
Version: 0.0.3
Summary: Connectomics Registration General Inference Engine
Home-page: https://github.com/supersergiy/corgie
Author: Sergiy Popovych
Author-email: sergiy.popovich@gmail.com
License: UNKNOWN
Description: # COnnectomics Registration Generalizable Inference Engine (corgie)
        
        Welcome to corgie! corgie is a command line tool built for registration of very large 3D volumes.
        
        # Installation
        
        ```
        pip install corgie
        ```
        
        # Example 
        
        ```
        corgie copy \
        --src_layer_spec '{
           "name": "unaligned",
           "path": "https://s3-hpcrc.rc.princeton.edu/minnie65-phase3-em/unaligned"
           }' \
        --src_layer_spec '{
           "name": "large_folds",
           "type": "mask",
           "path": "gs://seunglab_minnie_phase3/alignment/unaligned_fold_lengths/threshold_350"
           }' \
        --dst_folder "gs://corgie/demo/my_first_stack" \
        --start_coord "150000, 150000, 17000" \
        --end_coord "250000, 250000, 17020" \
        --mip 6 \
        --chunk_xy 1024 --chunk_z 1
        ```
        
        # Documentation
        [Link](https://corgie.readthedocs.io/en/latest/)
        
Platform: UNKNOWN
Requires-Python: >=3.7
Description-Content-Type: text/markdown
