Metadata-Version: 2.1
Name: metagene
Version: 0.0.0.dev46
Summary: Metagene Profiling Analysis and Visualization
Home-page: https://github.com/y9c/metagene
License: MIT
Keywords: DNA,RNA,metagene,biology
Author: Ye Chang
Author-email: yech1990@gmail.com
Requires-Python: >=3.8,<4.0
Classifier: License :: OSI Approved :: MIT License
Classifier: Programming Language :: Python :: 3
Classifier: Programming Language :: Python :: 3.8
Classifier: Programming Language :: Python :: 3.9
Classifier: Programming Language :: Python :: 3.10
Classifier: Programming Language :: Python :: 3.11
Requires-Dist: Click (>=8.0.0,<9.0.0)
Requires-Dist: asciichartpy (>=1.5.25,<2.0.0)
Requires-Dist: gtfparse (>=2.0.1,<3.0.0)
Requires-Dist: matplotlib (>=3.0.0,<4.0.0)
Requires-Dist: pandas (>=2.0.2,<3.0.0)
Requires-Dist: polars (<0.16.14)
Requires-Dist: pyarrow (>=13.0.0,<14.0.0)
Requires-Dist: pyranges (>=0.0.117,<0.0.118)
Requires-Dist: ray (>=2.6.3,<3.0.0)
Requires-Dist: rich (>=13.5.2,<14.0.0)
Requires-Dist: rich-click (>=1.6.1,<2.0.0)
Project-URL: Documentation, https://cf.readthedocs.io/
Project-URL: Repository, https://github.com/y9c/metagene
Description-Content-Type: text/markdown

# Metagene

[![Pypi Releases](https://img.shields.io/pypi/v/metagene.svg)](https://pypi.python.org/pypi/metagene)
[![Downloads](https://static.pepy.tech/badge/metagene)](https://pepy.tech/project/metagene)

**Metagene Profiling Analysis and Visualization**

(WIP)

## DEMO

![demo](docs/fig_metagene.svg)

- example

```bash
metagene -i metagene/data/input.bed.gz -t 10 -w 7,8,9 -n a,xxx,new -F GRCh38 -b 100 -o /dev/null -s test.tsv -p test.pdf
```

