**ExtLiverPCB** contains a large PKN and data set used in the references here
below. 

.. warning:: Note that they are a few variants of this data/PKN.


:references: 

    .. [1] **Morris, Melody K and Saez-Rodriguez, Julio and Clarke, David C and Sorger,Peter K and Lauffenburger, Douglas a**,
       *Training signaling pathway maps to biochemical data with constrained fuzzy logic: quantitative analysis of liver cell responses to inflammatory stimuli.*
       PLoS computational biology, 7, 3, 2011
       `Citation <http://www.pubmedcentral.nih.gov/articlerender.fcgi?artid=3048376>`_

    .. [2] **M. K. Morris, I. Melas, J. Saez-Rodriguez.**
       *Construction of cell type-specific logic models of signaling networks using CellNetOptimizer.* 
       to appear in Methods in Molecular Biology:Computational Toxicology, Ed.
       B. Reisfeld and A. Mayeno, Humana Press.

    .. [3] **J. Saez-Rodriguez, L. G. Alexopoulos, J. Epperlein, R. Samaga, D. A. Lauffenburger, S. Klamt and P. K. Sorger.**
       *Discrete logic modeling as a means to link pr    otein signaling networks with functional analysis of mammalian signal transduction*
       Molecular Systems Biology, 5:331, 2009



.. note:: there is a matlab version in the MATLAB SVN (trunk/CNO/Models/SampleModels/ExtLiverPKNPCB/) which has slight differences:

    #. irs1s is now irs1_s
    #. small caps are replaced by caps were needed
    #. intermediate and gates for the (stat1 1 stat13) and (stat1 1 stat13) reactions


:aliases: 
    * aliases to PKN-ExtLiverPCB.sif are ["ExtLiverPCB.sif"]
    * aliases to MD-ExtLiverPCB.csv are  ["ExtLiverPCB.csv"]





