Index

A

add_data_to_dataset() (renku.api.datasets.DatasetsApiMixin method)

add_step() (renku.models.cwl.workflow.Workflow method) Author (class in renku.models.datasets)

C

check_email() (renku.models.datasets.Author method) check_for_git_repo() (in module renku.api.datasets) CommandInputParameter (class in renku.models.cwl.parameter) CommandLineBinding (class in renku.models.cwl.parameter) CommandLineTool (class in renku.models.cwl.command_line_tool) CommandLineToolFactory (class in renku.models.cwl.command_line_tool)

CommandOutputBinding (class in renku.models.cwl.parameter) CommandOutputParameter (class in renku.models.cwl.parameter) convert_arguments() (in module renku.models.cwl.command_line_tool) convert_default() (in module renku.models.cwl.parameter) create() (renku.models.projects.ProjectCollection method) cwl_prefix (renku.api.repository.RepositoryApiMixin attribute)

D

datadir (renku.api.datasets.DatasetsApiMixin attribute) Dataset (class in renku.models.datasets) DatasetFile (class in renku.models.datasets)

DatasetsApiMixin (class in renku.api.datasets) Directory (class in renku.models.cwl.types) Dirent (class in renku.models.cwl.types)

F

File (class in renku.models.cwl.types) file_candidate() (renku.models.cwl.command_line_tool.CommandLineToolFactory method) find_previous_commit() (renku.api.repository.RepositoryApiMixin method) from_commit() (renku.models.datasets.Author class method)

from_git() (renku.models.datasets.Author class method) from_jsonld() (renku.models.datasets.Author class method) (renku.models.datasets.Dataset class method) (renku.models.datasets.DatasetFile class method)

G

generate_tool() (renku.models.cwl.command_line_tool.CommandLineToolFactory method) get_output_id() (renku.models.cwl.command_line_tool.CommandLineTool method) (renku.models.cwl.workflow.Workflow method)

git (renku.api.repository.RepositoryApiMixin attribute) guess_inputs() (renku.models.cwl.command_line_tool.CommandLineToolFactory method) guess_outputs() (renku.models.cwl.command_line_tool.CommandLineToolFactory method) guess_type() (renku.models.cwl.command_line_tool.CommandLineToolFactory method)

I

init_external_storage() (renku.api.repository.RepositoryApiMixin method) init_repository() (renku.api.repository.RepositoryApiMixin method) InputParameter (class in renku.models.cwl.parameter)

is_cwl() (renku.api.repository.RepositoryApiMixin method) iter_input_files() (renku.models.cwl.process.Process method) iter_output_files() (renku.models.cwl.process.Process method)

L

LocalClient (class in renku.api)

lock (renku.api.repository.RepositoryApiMixin attribute) LOCK_SUFFIX (renku.api.repository.RepositoryApiMixin attribute)

M

METADATA (renku.api.repository.RepositoryApiMixin attribute)

model (renku.models.projects.ProjectCollection.Meta attribute)

O

OutputParameter (class in renku.models.cwl.parameter)

P

Parameter (class in renku.models.cwl.parameter) PathMixin (class in renku.api.repository) Process (class in renku.models.cwl.process)

Project (class in renku.models.projects) ProjectCollection (class in renku.models.projects) ProjectCollection.Meta (class in renku.models.projects)

R

renku.api (module) renku.api.datasets (module) renku.api.repository (module) renku.cli (module) renku.cli.config (module) renku.cli.dataset (module) renku.cli.githooks (module) renku.cli.image (module) renku.cli.init (module) renku.cli.log (module) renku.cli.rerun (module) renku.cli.run (module) renku.cli.show (module) renku.cli.status (module)

renku.cli.update (module) renku.cli.workflow (module) renku.models.cwl (module) renku.models.cwl.command_line_tool (module) renku.models.cwl.parameter (module) renku.models.cwl.process (module) renku.models.cwl.types (module) renku.models.cwl.workflow (module) renku.models.datasets (module) renku.models.projects (module) renku_home (renku.api.repository.RepositoryApiMixin attribute) renku_metadata_path (renku.api.repository.RepositoryApiMixin attribute) renku_path (renku.api.repository.RepositoryApiMixin attribute) RepositoryApiMixin (class in renku.api.repository)

S

split_command_and_args() (renku.models.cwl.command_line_tool.CommandLineToolFactory method)

T

to_argv() (renku.models.cwl.command_line_tool.CommandLineTool method) (renku.models.cwl.parameter.CommandInputParameter method) (renku.models.cwl.parameter.CommandLineBinding method)

track_paths_in_storage() (renku.api.repository.RepositoryApiMixin method)

V

validate_command_line() (renku.models.cwl.command_line_tool.CommandLineToolFactory method)

validate_path() (renku.models.cwl.command_line_tool.CommandLineToolFactory method)

W

watch() (renku.models.cwl.command_line_tool.CommandLineToolFactory method) with_dataset() (renku.api.datasets.DatasetsApiMixin method) with_metadata() (renku.api.repository.RepositoryApiMixin method) with_workflow_storage() (renku.api.repository.RepositoryApiMixin method)

Workflow (class in renku.models.cwl.workflow) WORKFLOW (renku.api.repository.RepositoryApiMixin attribute) workflow_path (renku.api.repository.RepositoryApiMixin attribute) WorkflowOutputParameter (class in renku.models.cwl.parameter) WorkflowStep (class in renku.models.cwl.workflow)